Package index
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calculate_activity() - Calculate Activity Index Based on Zone Transitions
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check_overwrite_permissions() - Check for Existing Output Files and Prompt Overwrite Options
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clean_raw_uid() - Wrapper to clean UID temperature CSV: read, flag outliers, downsample, and plot
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downsample_activity() - Downsample activity index data to fixed intervals
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downsample_temperature() - Downsample temperature data to fixed intervals
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flag_temperature_outliers() - Flag temperature outliers based on rolling difference threshold
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interpolate_gaps() - Interpolate Short Gaps in UID Time Series Data
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plot_downsampled_temperature() - Plot and save downsampled temperature trace
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plot_outliers() - Plot and save outlier diagnostic
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process_all_uid_files() - Process All UID CSV Files in Batch
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quantify_temp_bouts() - Quantify bouts of temperature above or below a threshold
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read_raw_uid_csv() - Read and clean raw UID CSV file